Ways of running MISO and associated file formats ¶
MISO version 0.1 ( misopy-0.1.tar.gz), Christmas, 2012 release. MISO version 0.2 ( misopy-0.2.tar.gz), Janurelease. MISO version 0.3 ( misopy-0.3.tar.gz), Janurelease. MISO version 0.4 ( misopy-0.4.tar.gz), Janurelease. MISO version 0.4.1 ( misopy-0.4.1.tar.gz), Februrelease. MISO version 0.4.5 ( misopy-0.4.5.tar.gz), Septemrelease. MISO version 0.4.6 ( misopy-0.4.6.tar.gz), Septemrelease. MISO version 0.4.8 ( misopy-0.4.8.tar.gz), Aprelease. MISO version 0.4.9 ( misopy-0.4.9.tar.gz), Aprelease. MISO version 0.5.0 ( misopy-0.5.0.tar.gz), Februrelease. MISO version 0.5.1 ( misopy-0.5.1.tar.gz), Februrelease. 
MISO version 0.5.2 ( misopy-0.5.2.tar.gz), Marelease.MISO version 0.5.3 ( misopy-0.5.3.tar.gz), Marelease.MISO version 0.5.4 ( misopy-0.5.4.tar.gz), Jrelease ( Most recent).MISO is available as a Python package, listed as misopy in pypi (Python Package Index). General reading on probabilistic modeling and inference.
Bayes factors and Bayesian hypothesis testing. Probabilistic models in computational biology. Filtering differentially expressed events. Long-term archival and compression of MISO output. Detecting differentially expressed isoforms. Computing the insert length distribution and its statistics. Computing expression estimates (“Psi” / Ψ values). Preparing the alternative isoforms annotation. Human/mouse gene models for isoform-centric analyses. Using GFF event annotations with paired-end reads. Expanded alternative cleavage and polyadenylation annotation for mouse. Using MISO in parallel on multiple cores. Ways of running MISO and associated file formats. Installing the latest version from GitHub repository. Installing the fastmiso version of MISO. PSI PLOT FOR MAC SOFTWARE
MISO (Mixture of Isoforms) software documentation.
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